BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D01LP1|AL429555
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1712 1723 0.0
>3x_Contig1712
Length = 23668
Score = 1723 bits (869), Expect = 0.0
Identities = 879/881 (99%), Gaps = 1/881 (0%)
Strand = Plus / Plus
Query: 1 gcagcagcagcagcagcagcagtgttgtttacgctttgagcagctcttcctcgttagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4901 gcagcagcagcagcagcagcagtgttgtttacgctttgagcagctcttcctcgttagatg 4960
Query: 61 gcttgtcattcggttctcaaagcaaacctcggaggggaagtaatgtcgtttcaggaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4961 gcttgtcattcggttctcaaagcaaacctcggaggggaagtaatgtcgtttcaggaatgg 5020
Query: 121 gacttgagatgaatggaatttcagctggccatgttcattccctgggcactaattcgatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5021 gacttgagatgaatggaatttcagctggccatgttcattccctgggcactaattcgatgc 5080
Query: 181 atgttgctcctcaaatctatcatcaacccacaggtacaagttctatgcttagccaaagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5081 atgttgctcctcaaatctatcatcaacccacaggtacaagttctatgcttagccaaagtg 5140
Query: 241 gaattacagttgctacgaataataatatgataaggcctgccgttggatctacaaactcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5141 gaattacagttgctacgaataataatatgataaggcctgccgttggatctacaaactcgt 5200
Query: 301 actatcatccacctctgcatcatcgtaacacatgtgataatcgatcacgtcctcattccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5201 actatcatccacctctgcatcatcgtaacacatgtgataatcgatcacgtcctcattccc 5260
Query: 361 aaaaaagtggaaaacaacatataagctacgctcaacgtcatcacaatagtccaaccacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5261 aaaaaagtggaaaacaacatataagctacgctcaacgtcatcacaatagtccaaccacag 5320
Query: 421 ttgttaagggtaaagctaatgggaaggcagatatttgcgcacagtgcgggaaacaattca 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5321 ttgtaaagggtaaagctaatgggaaggcagatatttgcgcacagtgcgggaaacaattca 5380
Query: 481 caagacctagcgctctgcgtacgcatatgttggtacattctggcgataag-ctttcgaat 539
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5381 caagacctagcgctctgcgtacgcatatgttggtacattctggcgataagcctttcgaat 5440
Query: 540 gcacatgggaaggctgcaacaaaaaattcaatgttaagagtaatctcataaggcatctga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5441 gcacatgggaaggctgcaacaaaaaattcaatgttaagagtaatctcataaggcatctga 5500
Query: 600 agcttcacaagtaattctcatctctgtttgacgggttcacctcagtcggactcccactaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5501 agcttcacaagtaattctcatctctgtttgacgggttcacctcagtcggactcccactaa 5560
Query: 660 ttcaattctagcccttacaaaattcaaactgtgcacttcaccagttttctttgtttatgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5561 ttcaattctagcccttacaaaattcaaactgtgcacttcaccagttttctttgtttatgg 5620
Query: 720 ctccagcatgttatcattctcttccgatctttgcagcaagcactaatggcaaaattgaaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5621 ctccagcatgttatcattctcttccgatctttgcagcaagcactaatggcaaaattgaaa 5680
Query: 780 ccgcattaattcttttcttttccttcaacatatacaggctgttttcttcgcctaattacg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5681 ccgcattaattcttttcttttccttcaacatatacaggctgttttcttcgcctaattacg 5740
Query: 840 tttgctctctacctagttattagtttttgatttatatctcc 880
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 5741 tttgctctctacctagttattagtttttgatttatatctcc 5781
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7212
Number of Sequences: 1807
Number of extensions: 7212
Number of successful extensions: 341
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)